VectorIntervalMap Class Reference

Inheritance diagram for VectorIntervalMap:

Inheritance graph
Collaboration diagram for VectorIntervalMap:

Collaboration graph
List of all members.

Public Member Functions

virtual void add (gnSeqI left, gnSeqI right)
virtual void find (gnSeqI point, vector< uint > &intervals) const

Protected Attributes

vector< pair< gnSeqI, gnSeqI > > iv_map

Member Function Documentation

void VectorIntervalMap::add gnSeqI  left,
gnSeqI  right

Implements IntervalMap.

Definition at line 80 of file scoreAlignment.cpp.

void VectorIntervalMap::find gnSeqI  point,
vector< uint > &  intervals
const [virtual]

Implements IntervalMap.

Definition at line 87 of file scoreAlignment.cpp.

References uint.

Member Data Documentation

vector< pair< gnSeqI, gnSeqI > > VectorIntervalMap::iv_map [protected]

Definition at line 77 of file scoreAlignment.cpp.

The documentation for this class was generated from the following file:
Generated on Mon Aug 19 06:00:45 2013 for mauveAligner by doxygen 1.3.6