IntervalSeqManipulator Class Reference

List of all members.

Public Member Functions

template<typename ContainerType> void AddCopy (ContainerType &c, Interval &m) const
void CropLeft (Interval &m, gnSeqI amount) const
void CropRight (Interval &m, gnSeqI amount) const
 IntervalSeqManipulator (uint seq)
gnSeqI LeftEnd (Interval &m) const
gnSeqI Length (Interval &m) const

Private Attributes

uint m_seq

Constructor & Destructor Documentation

IntervalSeqManipulator::IntervalSeqManipulator uint  seq  )  [inline]
 

Definition at line 191 of file bbBreakOnGenes.cpp.

References uint.


Member Function Documentation

template<typename ContainerType>
void IntervalSeqManipulator::AddCopy ContainerType &  c,
Interval &  m
const [inline]
 

Definition at line 197 of file bbBreakOnGenes.cpp.

void IntervalSeqManipulator::CropLeft Interval &  m,
gnSeqI  amount
const [inline]
 

Definition at line 194 of file bbBreakOnGenes.cpp.

void IntervalSeqManipulator::CropRight Interval &  m,
gnSeqI  amount
const [inline]
 

Definition at line 195 of file bbBreakOnGenes.cpp.

gnSeqI IntervalSeqManipulator::LeftEnd Interval &  m  )  const [inline]
 

Definition at line 192 of file bbBreakOnGenes.cpp.

gnSeqI IntervalSeqManipulator::Length Interval &  m  )  const [inline]
 

Definition at line 193 of file bbBreakOnGenes.cpp.


Member Data Documentation

uint IntervalSeqManipulator::m_seq [private]
 

Definition at line 199 of file bbBreakOnGenes.cpp.


The documentation for this class was generated from the following file:
Generated on Mon Aug 19 06:00:44 2013 for mauveAligner by doxygen 1.3.6