Classes | |
| class | AlignFrame |
| A dialog box implementing a graphical interface to the command-line mauveAligner tool. More... | |
| interface | AlignmentProcessListener |
| class | AlignWorker |
| class | AnalysisDisplayWindow |
| class | AnalysisDisplayWindow::ContentManager |
| class | ConsoleDialog |
| class | ExportFrame |
| class | ExportMenu |
| class | FillLayout |
| class | FrameLoader |
| class | GenericAction |
| Generic class to propagate action events to a listener. More... | |
| class | GenomeCellRenderer |
| class | HintMessageEvent |
| interface | HintMessageListener |
| class | LcbLinePanel |
| This class is intended to overlay a RearrangementPanel with lines that connect each locally collinear block. More... | |
| class | LCBStatusBar |
| This class displays statistics about LCBs in a status bar. More... | |
| class | Mauve |
| class | Mauve::UpdateCheck |
| Checks the Mauve web server for a newer version of this software. More... | |
| class | MauveAlignFrame |
| class | MauveFrame |
| The window frame for a Mauve application, containing a menu bar, a tool bar and a RearrangementPanel to display genome alignments. More... | |
| class | MauveFrame::GenericAction |
| class | MauveRenderingHints |
| class | MauveRenderingHints::SimilarityDensityKey |
| class | MySymbolSequenceRenderer |
| A slightly revised version of Biojava's SymbolSequenceRenderer, which prints symbols near center of range for location, and offset a little further down. More... | |
| class | OutStreamPrinter |
| class | PrintPreviewCanvas |
| class | PrintPreviewDialog |
| class | PrintUtilities |
| A couple of utilities. More... | |
| class | ProgressiveMauveAlignFrame |
| class | QualifierPanel |
| class | RearrangementPanel |
| The primary container class for the visualization interface. More... | |
| class | RearrangementPanel::CtrlKeyDetector |
| CtrlKeyDetector is used to capture the press and release of the Ctrl key so that the cursor for zooming in and out can be changed. More... | |
| class | SequenceNavigator |
| A gui that allows a user to search genome features by annotation. More... | |
| class | SplashScreen |
| class | StyleMenu |
| class | SwingWorker |
| This is the 3rd version of SwingWorker (also known as SwingWorker 3), an abstract class that you subclass to perform GUI-related work in a dedicated thread. More... | |
| class | SwingWorker::ThreadVar |
| Class to maintain reference to current worker thread under separate synchronization control. More... | |
Description:
1.3.6