org::gel::mauve::contigs::FeatureFixer Class Reference

Inheritance diagram for org::gel::mauve::contigs::FeatureFixer:

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Collaboration diagram for org::gel::mauve::contigs::FeatureFixer:

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List of all members.

Public Member Functions

void process ()
void readOrdered (String file)

Static Public Member Functions

void main (String[] args)

Member Function Documentation

void org::gel::mauve::contigs::FeatureFixer::main String[]  args  )  [inline, static]
 

Parameters:
args 

Reimplemented from org::gel::mauve::contigs::ContigReorderer.

Definition at line 80 of file FeatureFixer.java.

void org::gel::mauve::contigs::FeatureFixer::process  )  [inline]
 

Reimplemented from org::gel::mauve::contigs::ContigReorderer.

Definition at line 45 of file FeatureFixer.java.

References org::gel::mauve::Genome::getChromosomes(), org::gel::mauve::Chromosome::getName(), and readOrdered().

void org::gel::mauve::contigs::FeatureFixer::readOrdered String  file  )  [inline]
 

Reimplemented from org::gel::mauve::contigs::ContigReorderer.

Definition at line 15 of file FeatureFixer.java.

References org::gel::mauve::Genome::getChromosomes(), org::gel::mauve::Chromosome::getName(), and org::gel::mauve::Chromosome::setName().

Referenced by process().


The documentation for this class was generated from the following file:
Generated on Mon Aug 19 06:03:56 2013 for Mauve by doxygen 1.3.6