org::gel::mauve::FilterCacheSpec Class Reference

List of all members.

Public Member Functions
	FilterCacheSpec (FeatureFilter filter, String[] annotations, FeatureRenderer renderer)
	FilterCacheSpec (FeatureFilter filter, FeatureRenderer renderer)
	FilterCacheSpec (FeatureFilter filter, String[] annotations)
	FilterCacheSpec (FeatureFilter filter)
String[]	getAnnotations ()
FeatureRenderer	getFeatureRenderer ()
FeatureFilter	getFilter ()
Public Attributes
String[]	annotations
FeatureFilter	filter
Static Public Attributes
final String	ALL_ANNOTATIONS = "ALL_ANNOTATIONS_99"
Private Attributes
FeatureRenderer	renderer

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Constructor & Destructor Documentation

org::gel::mauve::FilterCacheSpec::FilterCacheSpec (  FeatureFilter  filter  )  [inline]

Definition at line 15 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec (  FeatureFilter  filter, String[]  annotations )  [inline]

Definition at line 19 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec (  FeatureFilter  filter, FeatureRenderer  renderer )  [inline]

Definition at line 24 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec (  FeatureFilter  filter, String[]  annotations, FeatureRenderer  renderer )  [inline]

Definition at line 29 of file FilterCacheSpec.java.

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Member Function Documentation

String [] org::gel::mauve::FilterCacheSpec::getAnnotations (   )  [inline]

Definition at line 40 of file FilterCacheSpec.java. References annotations. Referenced by org::gel::mauve::format::DelegatingSequence::makeThinFeature().

FeatureRenderer org::gel::mauve::FilterCacheSpec::getFeatureRenderer (   )  [inline]

Definition at line 44 of file FilterCacheSpec.java. References renderer. Referenced by org::gel::mauve::gui::sequence::FeaturePanel::init(), and org::gel::mauve::gui::sequence::FeatureFilterer::initFeatureTypes().

FeatureFilter org::gel::mauve::FilterCacheSpec::getFilter (   )  [inline]

Definition at line 36 of file FilterCacheSpec.java. References filter. Referenced by org::gel::mauve::SeqFeatureData::getTypeFromFilterSpec().

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Member Data Documentation

final String org::gel::mauve::FilterCacheSpec::ALL_ANNOTATIONS = "ALL_ANNOTATIONS_99" [static]

Definition at line 7 of file FilterCacheSpec.java.

String [] org::gel::mauve::FilterCacheSpec::annotations

Definition at line 11 of file FilterCacheSpec.java. Referenced by getAnnotations().

FeatureFilter org::gel::mauve::FilterCacheSpec::filter

Definition at line 9 of file FilterCacheSpec.java. Referenced by org::gel::mauve::format::DelegatingSequence::addToCache(), and getFilter().

FeatureRenderer org::gel::mauve::FilterCacheSpec::renderer [private]

Definition at line 13 of file FilterCacheSpec.java. Referenced by getFeatureRenderer().

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The documentation for this class was generated from the following file:

• src/org/gel/mauve/FilterCacheSpec.java

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