org::gel::mauve::FilterCacheSpec Class Reference

List of all members.

Public Member Functions

 FilterCacheSpec (FeatureFilter filter, String[] annotations, FeatureRenderer renderer)
 FilterCacheSpec (FeatureFilter filter, FeatureRenderer renderer)
 FilterCacheSpec (FeatureFilter filter, String[] annotations)
 FilterCacheSpec (FeatureFilter filter)
String[] getAnnotations ()
FeatureRenderer getFeatureRenderer ()
FeatureFilter getFilter ()

Public Attributes

String[] annotations
FeatureFilter filter

Static Public Attributes

final String ALL_ANNOTATIONS = "ALL_ANNOTATIONS_99"

Private Attributes

FeatureRenderer renderer

Constructor & Destructor Documentation

org::gel::mauve::FilterCacheSpec::FilterCacheSpec FeatureFilter  filter  )  [inline]
 

Definition at line 15 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec FeatureFilter  filter,
String[]  annotations
[inline]
 

Definition at line 19 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec FeatureFilter  filter,
FeatureRenderer  renderer
[inline]
 

Definition at line 24 of file FilterCacheSpec.java.

org::gel::mauve::FilterCacheSpec::FilterCacheSpec FeatureFilter  filter,
String[]  annotations,
FeatureRenderer  renderer
[inline]
 

Definition at line 29 of file FilterCacheSpec.java.


Member Function Documentation

String [] org::gel::mauve::FilterCacheSpec::getAnnotations  )  [inline]
 

Definition at line 40 of file FilterCacheSpec.java.

References annotations.

Referenced by org::gel::mauve::format::DelegatingSequence::makeThinFeature().

FeatureRenderer org::gel::mauve::FilterCacheSpec::getFeatureRenderer  )  [inline]
 

Definition at line 44 of file FilterCacheSpec.java.

References renderer.

Referenced by org::gel::mauve::gui::sequence::FeaturePanel::init(), and org::gel::mauve::gui::sequence::FeatureFilterer::initFeatureTypes().

FeatureFilter org::gel::mauve::FilterCacheSpec::getFilter  )  [inline]
 

Definition at line 36 of file FilterCacheSpec.java.

References filter.

Referenced by org::gel::mauve::SeqFeatureData::getTypeFromFilterSpec().


Member Data Documentation

final String org::gel::mauve::FilterCacheSpec::ALL_ANNOTATIONS = "ALL_ANNOTATIONS_99" [static]
 

Definition at line 7 of file FilterCacheSpec.java.

String [] org::gel::mauve::FilterCacheSpec::annotations
 

Definition at line 11 of file FilterCacheSpec.java.

Referenced by getAnnotations().

FeatureFilter org::gel::mauve::FilterCacheSpec::filter
 

Definition at line 9 of file FilterCacheSpec.java.

Referenced by org::gel::mauve::format::DelegatingSequence::addToCache(), and getFilter().

FeatureRenderer org::gel::mauve::FilterCacheSpec::renderer [private]
 

Definition at line 13 of file FilterCacheSpec.java.

Referenced by getFeatureRenderer().


The documentation for this class was generated from the following file:
Generated on Mon Aug 19 06:03:45 2013 for Mauve by doxygen 1.3.6