org::gel::mauve::DbXrefFactory Class Reference

A factory class that tracks databases known to have a GenBank xref Use this class to map a GenBank db_xref to a URL. More...

Collaboration diagram for org::gel::mauve::DbXrefFactory:

[legend]List of all members.

Public Member Functions
void	addHandler (DbXrefHandler dxh)
String	getDbName (String db_xref) throws UnknownDatabaseException
String	getDbURL (String db_xref) throws UnknownDatabaseException
DbXrefHandler	getHandler (String db_xref) throws UnknownDatabaseException
void	removeHandler (String db_id)
Static Public Member Functions
DbXrefFactory	getInstance ()
Private Member Functions
	DbXrefFactory ()
Private Attributes
HashMap	handlers = new HashMap ()
Static Private Attributes
DbXrefFactory	instance = new DbXrefFactory ()

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Detailed Description

A factory class that tracks databases known to have a GenBank xref Use this class to map a GenBank db_xref to a URL.

Author:

koadman

Definition at line 17 of file DbXrefFactory.java.

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Constructor & Destructor Documentation

org::gel::mauve::DbXrefFactory::DbXrefFactory (   )  [inline, private]

Definition at line 63 of file DbXrefFactory.java. References org::gel::mauve::DbXrefHandler::getDbId(), and handlers.

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Member Function Documentation

void org::gel::mauve::DbXrefFactory::addHandler (  DbXrefHandler  dxh  )  [inline]

Definition at line 26 of file DbXrefFactory.java. References org::gel::mauve::DbXrefHandler::getDbId(), and handlers.

String org::gel::mauve::DbXrefFactory::getDbName (  String  db_xref  )  throws UnknownDatabaseException [inline]

Definition at line 44 of file DbXrefFactory.java. References getHandler(), and org::gel::mauve::DbXrefHandler::getName(). Referenced by org::gel::mauve::gui::sequence::FeaturePanel::DbXrefMenuItemBuilder::getItem().

String org::gel::mauve::DbXrefFactory::getDbURL (  String  db_xref  )  throws UnknownDatabaseException [inline]

Definition at line 35 of file DbXrefFactory.java. References getHandler(), and org::gel::mauve::DbXrefHandler::getURL(). Referenced by org::gel::mauve::gui::sequence::FeaturePanel::DbXrefMenuItemBuilder::getItem().

DbXrefHandler org::gel::mauve::DbXrefFactory::getHandler (  String  db_xref  )  throws UnknownDatabaseException [inline]

Definition at line 49 of file DbXrefFactory.java. References handlers. Referenced by getDbName(), and getDbURL().

DbXrefFactory org::gel::mauve::DbXrefFactory::getInstance (   )  [inline, static]

Definition at line 22 of file DbXrefFactory.java. References instance.

void org::gel::mauve::DbXrefFactory::removeHandler (  String  db_id  )  [inline]

Definition at line 31 of file DbXrefFactory.java. References handlers.

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Member Data Documentation

HashMap org::gel::mauve::DbXrefFactory::handlers = new HashMap () [private]

Definition at line 20 of file DbXrefFactory.java. Referenced by addHandler(), DbXrefFactory(), getHandler(), and removeHandler().

DbXrefFactory org::gel::mauve::DbXrefFactory::instance = new DbXrefFactory () [static, private]

Definition at line 18 of file DbXrefFactory.java. Referenced by getInstance().

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The documentation for this class was generated from the following file:

• src/org/gel/mauve/DbXrefFactory.java

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