mems::AlnProgressTracker Struct Reference

#include <GreedyBreakpointElimination.h>

List of all members.

Public Attributes

gnSeqI cur_leftend
double prev_progress
gnSeqI total_len


Member Data Documentation

gnSeqI mems::AlnProgressTracker::cur_leftend
 

Definition at line 865 of file GreedyBreakpointElimination.h.

Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().

double mems::AlnProgressTracker::prev_progress
 

Definition at line 866 of file GreedyBreakpointElimination.h.

Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().

gnSeqI mems::AlnProgressTracker::total_len
 

Definition at line 864 of file GreedyBreakpointElimination.h.

Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().


The documentation for this struct was generated from the following file:
Generated on Fri Mar 14 06:01:39 2008 for libMems by doxygen 1.3.6