libMems/SortedMerList.cpp File Reference

#include "libMems/SortedMerList.h"

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Namespaces
namespace	mems
Defines
#define	OPT_ALPHA_MASQ   0x00000003
#define	OPT_HEADER_ALPHABET_BITS   DNA_ALPHA_BITS

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Define Documentation

#define OPT_ALPHA_MASQ   0x00000003

Definition at line 590 of file SortedMerList.cpp. Referenced by mems::SortedMerList::FillDnaSML(), and mems::SortedMerList::RevCompMer().

#define OPT_HEADER_ALPHABET_BITS   DNA_ALPHA_BITS

Definition at line 304 of file SortedMerList.cpp. Referenced by mems::SortedMerList::FillDnaSML(), mems::SortedMerList::FillSML(), mems::SortedMerList::GetBSequence(), mems::SortedMerList::GetMer(), mems::SortedMerList::GetSeedMer(), mems::SortedMerList::RevCompMer(), mems::SortedMerList::translate(), and mems::SortedMerList::translate32().

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