libMems/SortedMerList.cpp File Reference

#include "libMems/SortedMerList.h"

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Namespaces

namespace  mems

Defines

#define OPT_ALPHA_MASQ   0x00000003
#define OPT_HEADER_ALPHABET_BITS   DNA_ALPHA_BITS


Define Documentation

#define OPT_ALPHA_MASQ   0x00000003
 

Definition at line 590 of file SortedMerList.cpp.

Referenced by mems::SortedMerList::FillDnaSML(), and mems::SortedMerList::RevCompMer().

#define OPT_HEADER_ALPHABET_BITS   DNA_ALPHA_BITS
 

Definition at line 304 of file SortedMerList.cpp.

Referenced by mems::SortedMerList::FillDnaSML(), mems::SortedMerList::FillSML(), mems::SortedMerList::GetBSequence(), mems::SortedMerList::GetMer(), mems::SortedMerList::GetSeedMer(), mems::SortedMerList::RevCompMer(), mems::SortedMerList::translate(), and mems::SortedMerList::translate32().


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